BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006H05LP1|AL425601
(390 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 658 0.0
>3x_Contig1619
Length = 7770
Score = 658 bits (326), Expect = 0.0
Identities = 360/377 (95%), Gaps = 1/377 (0%)
Strand = Plus / Plus
Query: 13 atttcccgcggacacctcccttcggggggtgccgcgggtagatattaatttatataagcc 72
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5555 atttcccgcggtcacctcccttcggggggtgccgcgggtagatattaatttatataagcc 5614
Query: 73 ccaaatgcatcatccctatgaggatgtcgcatttggggcaaagcggtgaatactgagaat 132
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5615 ccaaatgcatcatccctatgaggatgtcgcatttggggcaaag-ggtgaatactgagaat 5673
Query: 133 tgarctcagatttaacgcgccacaagcattctttctacctttgaratatattcacctata 192
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5674 tgaactcagatttaacgcgccacaagcattctttctacctttgaaatatattcacctata 5733
Query: 193 attatatataavrvtatgggrrartggacgggnaatatgagagtcgaactcataagaaca 252
||||||||||| ||| | | || |||| |||||||||||||||||||||||||||
Sbjct: 5734 attatatataaaaatatagaaaaatgaacggaaaatatgagagtcgaactcataagaaca 5793
Query: 253 tagttcaattatgtagcaaataatctaccttaccaatagtgaattttcctattacgartc 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5794 tagttcaattatgtagcaaataatctaccttaccaatagtgaattttcctattacgaatc 5853
Query: 313 tmatcagacttgcactgacatcaaccatcgtgacaagatgggactttactattaagctac 372
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5854 taatcagacttgcactgacatcaaccatcgtgacaagatgggactttactattaagctac 5913
Query: 373 agatccattatataatt 389
|||||||||||||||||
Sbjct: 5914 agatccattatataatt 5930
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1764
Number of Sequences: 1807
Number of extensions: 1764
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 390
length of database: 10,358,551
effective HSP length: 15
effective length of query: 375
effective length of database: 10,331,446
effective search space: 3874292250
effective search space used: 3874292250
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)